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e-book
A Primer for Computational Biology aims to provide life scientists and students the skills necessary for research in a data-rich world. The text covers accessing and using remote servers via the command-line, writing programs and pipelines for data analysis, and provides useful vocabulary for interdisciplinary work. The book is broken into three parts: Introduction to Unix/Linux: The command-line is the “natural environment” of scientific computing, and this part covers a wide range of topics, including logging in, working with files and directories, installing programs and writing scripts, and the powerful “pipe” operator for file and data manipulation. Programming in Python: Python is both a premier language for learning and a common choice in scientific software development. This part covers the basic concepts in programming (data types, if-statements and loops, functions) via examples of DNA-sequence analysis. This part also covers more complex subjects in software development such as objects and classes, modules, and APIs. Programming in R: The R language specializes in statistical data analysis, and is also quite useful for visualizing large datasets. This third part covers the basics of R as a programming language (data types, if-statements, functions, loops and when to use them) as well as techniques for large-scale, multi-test analyses. Other topics include S3 classes and data visualization with ggplot2.
- Subjects:
- Biology
- Keywords:
- Computational biology Textbooks
- Resource Type:
- e-book
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Video
Sue Desmond-Hellmann is using precision public health -- an approach that incorporates big data, consumer monitoring, gene sequencing and other innovative tools -- to solve the world's most difficult medical problems. It's already helped cut HIV transmission from mothers to babies by nearly half in sub-Saharan Africa, and now it's being used to address alarming infant mortality rates all over the world. The goal: to save lives by bringing the right interventions to the right populations at the right time.
- Subjects:
- Health Sciences and Biology
- Keywords:
- Medicial informatics Big data Public health
- Resource Type:
- Video
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e-book
A Student’s Guide to Tropical Marine Biology is written entirely by students enrolled in the Keene State College Tropical Marine Biology course taught by Dr. Karen Cangialosi.Our goal was to investigate three main aspects of tropical marine biology: understanding the system, identifying problems, and evaluating solutions. Each of the sections contains chapters that utilize openly licensed material and images, and are rich with hyperlinks to other sources. Some of the most pressing tropical marine ecosystem issues are broken up into five sections: Coral Reefs and Diversity, Common Fishes to the Coral Reef, Environmental Threats, Reef Conservation, and Major Marine Phyla. These sections are not mutually exclusive; repetition in some content between chapters is intentional as we expect that users may not read the whole book.
- Subjects:
- Biology
- Keywords:
- Textbooks Marine biology
- Resource Type:
- e-book
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Others
In this interactive object, learners identify the parts of an animal cell and its organelles.
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Video
In this video, learners view the parts of an animal cell and its organelles.
- Subjects:
- Biology
- Keywords:
- Cell -- Physiology Cytology Cell organelles
- Resource Type:
- Video
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Video
We're going to take apart a plastic anatomy model and see what we can find in the abdomen. We'll identify as many organs as we can, see how they fit into the abdomen relative to one another, working our way from anterior to posterior.
- Course related:
- HTI17102 Imaging Anatomy
- Subjects:
- Health Sciences and Biology
- Keywords:
- Organs (Anatomy) Abdomen
- Resource Type:
- Video
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Video
Students read about how acid/base balance affects a person's health. This activity includes animation.
- Subjects:
- Health Sciences and Biology
- Keywords:
- Acid-base imbalances
- Resource Type:
- Video
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Others
Students read and test themselves on the conditions that cause specific acid/base imbalances.
- Subjects:
- Health Sciences and Biology
- Keywords:
- Acid-base imbalances
- Resource Type:
- Others
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Others
In this interactive object, learners identify the symptoms of fluid volume excess and fluid volume deficit.
- Subjects:
- Health Sciences and Biology
- Keywords:
- Body fluid disorders
- Resource Type:
- Others
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Courseware
The aim of this class is to introduce the exciting and often under appreciated discoveries in RNA biology by exploring the diversity of RNAs—encompassing classical molecules such as ribosomal RNAs (rRNAs), transfer RNAs (tRNAs) and messenger RNAs (mRNAs) as well as newer species, such as microRNAs (miRNAs), long-noncoding RNAs (lncRNAs), and circular RNAs (circRNAs). For each new class of RNA, we will evaluate the evidence for its existence as well as for its proposed function. Students will develop both a deep understanding of the field of RNA biology and the ability to critically assess new papers in this fast-paced field. This course is one of many Advanced Undergraduate Seminars offered by the Biology Department at MIT. These seminars are tailored for students with an interest in using primary research literature to discuss and learn about current biological research in a highly interactive setting. Many instructors of the Advanced Undergraduate Seminars are postdoctoral scientists with a strong interest in teaching.
- Subjects:
- Biology
- Keywords:
- RNA
- Resource Type:
- Courseware
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Others
Students identify the various regions of the human body through drag-and-drop exercises.
- Subjects:
- Health Sciences and Biology
- Keywords:
- Human body Human anatomy
- Resource Type:
- Others
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Others
In this interactive learning activity, learners review the terms used to describe relative position of body parts in order to have a common set of words to describe their position.
- Subjects:
- Health Sciences and Biology
- Keywords:
- Human anatomy -- Terminology
- Resource Type:
- Others
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e-book
Anatomy and Physiology is a dynamic textbook for the yearlong Human Anatomy and Physiology course taught at most two- and four-year colleges and universities to students majoring in nursing and allied health. A&P is 29 chapters of pedagogically effective learning content, organized by body system, and written at an audience-appropriate level. The lucid text, strategically constructed art, inspiring career features, and links to external learning tools address the critical teaching and learning challenges in the course. Color is used for pedagogical effect in A&P. Most art will consist of elegant black line, with the strongest line illustrating the most important structure(s) and shading used to show dimension and shape. Color (used only when needed) highlights and clarifies the primary anatomical or functional point of the illustration. Student focus is drawn to the most important learning point in each illustration, without distraction from excessive gradients, shadows, and loud highlights. The online book provides students with links to surgical videos, histology, interactive diagrams, and cadaver imagery at critical junctures. The text will publish in early June 2013. OpenStax College has compiled many resources for faculty and students, from faculty-only content to interactive homework and study guides.
- Subjects:
- Biology
- Keywords:
- Physiology Textbooks Anatomy
- Resource Type:
- e-book
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e-book
Veterinary nurses need to have a firm grasp of the normal structure of an animal's body and how it functions before they can understand the effect diseases and injuries have and the best ways to treat them. This book describes the structure of the animal body and the way in which it works. Animals encountered in normal veterinary practice are used as examples where possible.
- Subjects:
- Biology
- Keywords:
- Physiology Textbooks Anatomy
- Resource Type:
- e-book
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Others
This learning object demonstrates the process by which antigens are identified, processed, and presented to mediators of the cellular immune system.
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e-journal
In this journal platform, you can find the articles which published under the Creative Commons Attribution 3.0 Unported (CC-BY) license. They may be downloaded, printed, distributed, or posted online as long as they are properly attributed. The journal including:
Computer Reviews Journal
Journal of Drug and Alcohol Research
Journal of Evolutionary Medicine Journal of Orthopaedics and Trauma
MathLAB Journal Socialsci Journal
To Chemistry Journal
To Physics Journal
Mintage Journal of Pharmaceutical and Medical Sciences
Journal of Foreign Language Education and Technology
- Subjects:
- Medicine, Chemistry, Computing, Biology, Foreign Language Learning, and Physics
- Keywords:
- Science Periodicals Computer science Language languages--Computer-assisted instruction Medicine Technology Chemistry Social sciences Physics
- Resource Type:
- e-journal
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Courseware
This course is intended for the student interested in understanding and appreciating common biological topics in the study of the smallest units within biology: molecules and cells. Molecular and cellular biology is a dynamic field. There are thousands of opportunities within the medical, pharmaceutical, agricultural, and industrial fields (just to name a few) for a person with a concentrated knowledge of molecular and cellular processes. This course will give you a general introduction to these topics. In addition to preparing for a diversity of career paths, an understanding of molecular and cell biology will help you make sound decisions in your everyday life that can positively impact your diet and health. This course includes the following units: Unit 1: Introduction to Biology Unit 2: Basic Chemistry Unit 3: Biological Molecules Unit 4: Cells and Cell Membranes Unit 5: Enzymes, Metabolism, Cellular Respiration Unit 6: Photosynthesis Unit 7: Cellular Reproduction: Mitosis Unit 8: Cellular Reproduction: Meiosis Unit 9: Mendelian Genetics and Chromosomes Unit 10: Gene Expression
- Course related:
- ABCT1102 General Biology and ABCT2312 Introductory Cell Biology and Biochemistry
- Subjects:
- Biology
- Keywords:
- Cytology Molecular biology
- Resource Type:
- Courseware
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e-book
A grasp of the logic and practice of science is essential to understand the rest of the world around us. To that end, the CMB3e iText (like earlier editions) remains focused on experimental support for what we know about cell and molecular biology, and on showing students the relationship of cell structure and function. Rather than trying to be a comprehensive reference book, CMB3e selectively details investigative questions, methods and experiments that lead to our understanding of cell biology. This focus is nowhere more obvious than in the chapter learning objectives and in external links to supplementary material. The Basic CMB3e version of the iText includes links to external web-sources as well as the author’s short, just-in-time YouTube VOPs (with edited, optional closed captions), all embedded in or near relevant text. Each video is identified with a descriptive title and video play and QR bar codes. The Learning objectives align with content and ask students to use new knowledge to make connections and deepen their understanding of concept and experiment. All external links are intended to expand or explain textual content and concepts and to engage student curiosity. Links to full VOP lectures are now at the back of the book. include optional edited closed captions. All images in the iText are by the author or are from public domain or Creative Commons (CC) licensed sources. For all externally sourced images, CC licenses are indicated with the image. Beyond the Basic CMB3e, the freely available Annotated CMB3e contains interactive links and formative assessments in the form of Challenge boxes. A CMB3e Sample Chapter and CMB3e iText for Instructors model additional interactive features, including short 25 Words or Less writing assignments that can be incorporated into almost any course management system, and all of which the author assigned as homework in his flipped, blended course. These assessments aim to reinforce writing as well as critical thinking skills. The CMB3e Sample Chapter is freely available for download; the CMB3e for Instructors version of the iText is available on request. My goal in writing this iText is to make the content engaging, free and comparable in accuracy and currency to commercial textbooks. I encourage instructors to use the interactive features of the iText (critical thought questions, YouTube videos, etc.) to challenge their students. With all of these enhancements, I encourage students to think about • how good and great experiments were inspired and designed, • how alternative experimental results were predicted, • how data was interpreted, and finally, • investigators (and we!) arrive at the most interesting “next questions”. The online iText is the most efficient way to access links and complete online assignments. Nevertheless, you can download, read, study, and access many links with a smart phone or tablet. And you can add your own annotations digitally, or write in the margins of a printout the old-fashioned way! Your instructor may provide additional instructions for using your iText.
- Subjects:
- Biology
- Keywords:
- Textbooks Cytology Molecular biology
- Resource Type:
- e-book
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Others
Welcome to the BioNinja Website – your one-stop resource for everything IB Biology related! This website is designed specifically for the new IB Biology syllabus (2016 –) This site is still under development, so new features will be periodically added This site was optimised for Safari – certain features may not work on other browsers For access to the old website (2009 – 2015 syllabus), click here
- Course related:
- ABCT1102 General Biology
- Subjects:
- Biology
- Keywords:
- Biology
- Resource Type:
- Others
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Courseware
Cell biology, biochemistry, genetics, and the biology of organ systems, Covers concepts of building blocks (nucleotides, amino acids, and cells) and of information flow (DNA to proteins, receptors to nuclei, the blood to distant organs, and DNA to offspring)
- Subjects:
- Biology
- Keywords:
- DNA Biochemistry Cytology Biology
- Resource Type:
- Courseware